In the paper, we consider the structure of the extended passenger transport Hyperloop systems, when the mainline (magistral) has side branches. To preserve the system’s speed capabilities, we divide the used passenger capsules into express capsules and local capsules. Express capsules use only the mainline, which they pass without stopping at the highest possible speed. Local capsules serve lateral branches and possible intermediate stations. These capsules travel between branches using the same mainline. At the same time, we offer solutions that ensure conditions when express and local capsules do not interfere with each other.